OBO Community Health

This page gives insight into which OBO Foundry ontologies are actively being updated and feedback given to users. It was generated using the GitHub API with scripts at https://github.com/cthoyt/obo-community-health on 2024-12-26. See also the summary of ontology responsible people.

OBO ID Name Contact Score GitHub Stars Open Issues OBO Topic ODK Config Recently Pushed Recently Interacted Last Year Total Contributions Last Year Unique Contributors Last Year Top Contributor Lifetime Total Contributions Lifetime Unique Contributors Lifetime Top Contributor License Bioregistry Bioportal OLS Messages
ado Alzheimer's Disease Ontology @akodamullil 5 GitHub 🟢 0 7 No 🔴 🔴 None 2023-09-21 2022-06-20 0 0 ado ADO ado
  • Contact is inactive
  • Missing obofoundry github topic
  • Not using odk
  • Not recently pushed
  • No license on github
afpo African Population Ontology @Melek-C 1 GitHub 🟢 2 7 No 🔴 🔴 None 2024-10-02 2024-10-02 0 0 afpo AFPO
  • Contact is inactive
  • Could not look up contact on wikidata via github
  • Missing ols mapping
  • Missing obofoundry github topic
  • Not using odk
  • No license on github
agro Agronomy Ontology @marieALaporte 21 GitHub 🟢 54 32 Yes 🟢 🔴 None 2023-05-31 2024-12-09 0 0 cc-by-4.0 agro AGRO agro
  • Not using odk
  • Not recently pushed
aism Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM) @JCGiron 10 GitHub 🟢 10 1 Yes 🟢 🟢 1.3.1 2024-06-20 2024-06-21 0 0 cc0-1.0 aism AISM aism
  • Title contains prefix
  • Contact is inactive
amphx The Amphioxus Development and Anatomy Ontology @hescriva 9 GitHub 🟢 3 3 Yes 🟢 🔴 None 2022-10-07 2022-10-07 0 0 amphx AMPHX amphx
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
apo Ascomycete phenotype ontology @srengel 19 GitHub 🟢 4 1 Yes 🟢 🔴 None 2024-10-23 2023-03-28 0 0 cc-by-4.0 apo APO apo
  • Not using odk
apollo_sv Apollo Structured Vocabulary @hoganwr 20 GitHub 🟢 10 16 Yes 🟢 🔴 None 2024-12-24 2024-12-24 0 0 cc-by-4.0 apollosv APOLLO-SV apollo_sv
  • Not using odk
aro Antibiotic Resistance Ontology @agmcarthur 20 GitHub 🟢 17 4 Yes 🟢 🔴 None 2024-12-18 2024-12-18 0 0 cc-by-4.0 aro ARO aro
  • Not using odk
bco Biological Collections Ontology @ramonawalls 24 GitHub 🟢 22 25 Yes 🟢 🟢 1.2.30 2021-11-15 2023-11-28 0 0 cc0-1.0 bco BCO bco
  • Not recently pushed
bfo Basic Formal Ontology @phismith 20 GitHub 🟢 268 172 Yes 🟢 🔴 None 2024-01-30 2024-10-07 0 0 cc-by-4.0 bfo BFO bfo
  • Contact is inactive
  • Not using odk
bspo Biological Spatial Ontology @cmungall 19 GitHub 🟢 13 12 Yes 🟢 🟢 1.3.1 2023-05-31 2024-01-11 0 0 other bspo BSPO bspo
  • Not recently pushed
  • Non-standard license given on github
bto BRENDA tissue / enzyme source @chdudek 22 GitHub 🟢 4 23 Yes 🟢 🟢 1.2.19 2023-06-20 2024-10-15 0 0 cc-by-4.0 bto BTO bto
  • Not recently pushed
caro Common Anatomy Reference Ontology @mellybelly 17 GitHub 🟢 3 20 Yes 🟢 🟢 1.3.0 2023-03-15 2023-03-13 0 0 cc-by-4.0 caro CARO caro
  • Contact is inactive
  • Not recently pushed
cdao Comparative Data Analysis Ontology @balhoff 20 GitHub 🟢 9 7 Yes 🟢 🔴 None 2024-01-25 2024-01-30 0 0 cc0-1.0 cdao CDAO cdao
  • Not using odk
cdno Compositional Dietary Nutrition Ontology @LilyAndres 20 GitHub 🟢 11 19 Yes 🟢 🔴 None 2024-11-13 2024-12-13 0 0 cc0-1.0 cdno CDNO cdno
  • Not using odk
chebi Chemical Entities of Biological Interest @amalik01 21 GitHub 🟢 46 410 Yes 🟢 🔴 None 2022-04-20 2024-12-24 0 0 cc-by-4.0 chebi CHEBI chebi
  • Not using odk
  • Not recently pushed
cheminf Chemical Information Ontology @egonw 20 GitHub 🟢 17 30 Yes 🟢 🔴 None 2024-04-19 2024-04-19 0 0 cc0-1.0 cheminf CHEMINF cheminf
  • Not using odk
chiro CHEBI Integrated Role Ontology @nicolevasilevsky 14 GitHub 🟢 6 12 Yes 🟢 🔴 None 2022-11-10 2022-11-10 0 0 other chiro CHIRO chiro
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
chmo Chemical Methods Ontology @batchelorc 19 GitHub 🟢 12 11 Yes 🟢 🔴 None 2023-12-14 2024-04-03 0 0 cc-by-4.0 chmo CHMO chmo
  • Not using odk
  • Not recently pushed
cido Coronavirus Infectious Disease Ontology @yongqunh 21 GitHub 🟢 21 25 Yes 🟢 🔴 None 2024-02-16 2024-02-16 0 0 cc-by-4.0 cido CIDO cido
  • Not using odk
cio Confidence Information Ontology @fbastian 18 GitHub 🟢 5 2 Yes 🟢 🔴 None 2021-01-07 2023-03-06 0 0 cc0-1.0 cio CIO cio
  • Not using odk
  • Not recently pushed
cl Cell Ontology @addiehl 27 GitHub 🟢 151 296 Yes 🟢 🟢 1.3.1 2024-12-24 2024-12-24 0 0 cc-by-4.0 cl CL cl
clao Collembola Anatomy Ontology @luis-gonzalez-m 17 GitHub 🟢 2 2 Yes 🟢 🟢 1.2.29 2023-07-17 2024-01-17 0 0 cc0-1.0 clao CLAO clao
  • Contact is inactive
  • Not recently pushed
clo Cell Line Ontology @zhengj2007 16 GitHub 🟢 18 86 Yes 🟢 🔴 None 2024-06-24 2024-04-16 0 0 clo CLO clo
  • Not using odk
  • No license on github
clyh Clytia hemisphaerica Development and Anatomy Ontology @L-Leclere 9 GitHub 🟢 2 0 Yes 🟢 🔴 None 2020-05-29 2021-06-08 0 0 clyh CLYH clyh
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
cmo Clinical measurement ontology @jrsjrs 14 GitHub 🟢 3 11 Yes 🟢 🔴 None 2024-12-20 2024-11-19 0 0 cmo CMO cmo
  • Not using odk
  • No license on github
cob Core Ontology for Biology and Biomedicine @bpeters42 25 GitHub 🟢 39 117 Yes 🟢 🟢 1.3.1 2024-12-12 2024-12-12 0 0 cc0-1.0 cob COB cob
colao Coleoptera Anatomy Ontology (COLAO) @JCGiron 9 GitHub 🟢 5 1 Yes 🟢 🟢 1.3.1 2024-06-21 2024-06-21 0 0 cc-by-4.0 colao COLAO colao
  • Title contains prefix
  • Contact is inactive
cro Contributor Role Ontology @marijane 16 GitHub 🟢 21 18 Yes 🟢 🔴 None 2023-08-16 2024-12-03 0 0 cro CRO cro
  • Not using odk
  • Not recently pushed
  • No license on github
cteno Ctenophore Ontology @cmungall 13 GitHub 🟢 3 2 Yes 🟢 🔴 None 2016-10-20 2021-06-08 0 0 other cteno CTENO cteno
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
cto CTO: Core Ontology of Clinical Trials @akodamullil 2 GitHub 🟢 11 16 Yes 🟢 🔴 None 2024-05-31 2024-05-31 0 0 cto CTO cto
  • Title contains prefix
  • Contact is inactive
  • Not using odk
  • No license on github
cvdo Cardiovascular Disease Ontology @pfabry 19 GitHub 🟢 6 1 Yes 🟢 🔴 None 2024-06-17 2024-07-12 0 0 cc-by-4.0 cvdo CVDO cvdo
  • Not using odk
ddanat Dictyostelium discoideum anatomy @pfey03 12 GitHub 🟢 1 9 Yes 🟢 🔴 None 2024-09-10 2024-08-23 0 0 mit ddanat DDANAT ddanat
  • Not using odk
  • Inappropriate software license given on github
ddpheno Dictyostelium discoideum phenotype ontology @pfey03 22 GitHub 🟢 6 5 Yes 🟢 🟢 1.3.0 2023-12-14 2024-02-28 0 0 cc0-1.0 ddpheno DDPHENO ddpheno
  • Not recently pushed
dideo Drug-drug Interaction and Drug-drug Interaction Evidence Ontology @mbrochhausen 19 GitHub 🟢 15 2 Yes 🟢 🔴 None 2023-10-25 2023-10-25 0 0 cc-by-4.0 dideo DIDEO dideo
  • Not using odk
  • Not recently pushed
disdriv Disease Drivers Ontology @lschriml 18 GitHub 🟢 3 0 Yes 🟢 🔴 None 2024-04-18 0 0 cc0-1.0 disdriv DISDRIV disdriv
  • Not using odk
doid Human Disease Ontology @lschriml 24 GitHub 🟢 350 51 Yes 🟢 🔴 None 2024-12-23 2024-12-18 0 0 cc0-1.0 doid DOID doid
  • Not using odk
dpo Drosophila Phenotype Ontology @Clare72 23 GitHub 🟢 4 22 Yes 🟢 🟢 1.3.1 2024-12-05 2024-12-05 0 0 cc-by-4.0 fbcv FB-CV fbcv
dron The Drug Ontology @hoganwr 14 GitHub 🟢 10 6 No 🔴 🟢 1.2.27 2024-12-24 2024-12-24 0 0 dron DRON dron
  • Missing obofoundry github topic
  • No license on github
duo Data Use Ontology @mcourtot 17 GitHub 🟢 67 60 Yes 🟢 🔴 None 2022-09-21 2024-09-04 0 0 other duo DUO duo
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
ecao The Echinoderm Anatomy and Development Ontology @ettensohn 14 GitHub 🟢 2 0 Yes 🟢 🟢 1.2.22 2024-11-13 2023-03-03 0 0 ecao ECAO ecao
  • Contact is inactive
  • No license on github
eco Evidence and Conclusion Ontology @mgiglio99 22 GitHub 🟢 49 23 Yes 🟢 🔴 None 2024-07-19 2024-10-03 0 0 cc0-1.0 eco ECO eco
  • Not using odk
ecocore An ontology of core ecological entities @pbuttigieg 19 GitHub 🟢 15 24 Yes 🟢 🟢 1.3.0 2023-12-14 2023-12-14 0 0 ecocore ECOCORE ecocore
  • Not recently pushed
  • No license on github
ecto Environmental conditions, treatments and exposures ontology @diatomsRcool 21 GitHub 🟢 32 70 Yes 🟢 🟢 1.3.1 2024-03-13 2024-10-23 0 0 other ecto ECTO ecto
  • Non-standard license given on github
emapa Mouse Developmental Anatomy Ontology @tfhayamizu 14 GitHub 🟢 5 61 Yes 🟢 🔴 None 2023-11-14 2024-11-20 0 0 other emapa EMAPA emapa
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
envo Environment Ontology @pbuttigieg 23 GitHub 🟢 138 524 Yes 🟢 🔴 None 2024-12-17 2024-12-21 0 0 cc0-1.0 envo ENVO envo
  • Not using odk
epio Epilepsy Ontology @akodamullil 0 GitHub 🟢 2 1 No 🔴 🔴 None 2023-01-04 2023-02-20 0 0 mit epio EPIO
  • Contact is inactive
  • Missing ols mapping
  • Missing obofoundry github topic
  • Not using odk
  • Not recently pushed
  • Inappropriate software license given on github
exo Exposure ontology @diatomsRcool 17 GitHub 🟢 3 7 Yes 🟢 🔴 None 2022-12-15 2022-12-15 0 0 cc-by-4.0 exo EXO exo
  • Not using odk
  • Not recently pushed
fao Fungal gross anatomy @ValWood 19 GitHub 🟢 9 7 Yes 🟢 🔴 None 2022-10-26 2023-05-24 0 0 cc0-1.0 fao FAO fao
  • Not using odk
  • Not recently pushed
fbbt Drosophila gross anatomy @Clare72 24 GitHub 🟢 18 22 Yes 🟢 🟢 1.3.1 2024-12-18 2024-12-18 0 0 cc-by-4.0 fbbt FB-BT fbbt
fbcv FlyBase Controlled Vocabulary @Clare72 24 GitHub 🟢 9 0 Yes 🟢 🟢 1.3.1 2024-12-05 2024-12-05 0 0 cc-by-4.0 fbcv FB-CV fbcv
fbdv Drosophila development @Clare72 23 GitHub 🟢 4 0 Yes 🟢 🟢 1.3.1 2024-12-04 2024-12-04 0 0 cc-by-4.0 fbdv FB-DV fbdv
fideo Food Interactions with Drugs Evidence Ontology @getbordea 9 No 🔴 0 0 No 🔴 🔴 None 0 0 0 0 fideo FIDEO fideo
  • Contact is inactive
flopo Flora Phenotype Ontology @leechuck 14 GitHub 🟢 9 4 Yes 🟢 🔴 None 2019-09-06 2022-10-20 0 0 bsd-3-clause flopo FLOPO flopo
  • Not using odk
  • Not recently pushed
  • Inappropriate software license given on github
fobi Food-Biomarker Ontology @pcastellanoescuder 19 GitHub 🟢 16 2 Yes 🟢 🔴 None 2022-05-03 2022-05-03 0 0 cc-by-4.0 fobi FOBI fobi
  • Not using odk
  • Not recently pushed
foodon Food Ontology @ddooley 23 GitHub 🟢 186 67 Yes 🟢 🔴 None 2024-10-21 2024-12-20 0 0 cc-by-4.0 foodon FOODON foodon
  • Not using odk
fovt FuTRES Ontology of Vertebrate Traits @megbalk 21 GitHub 🟢 3 35 Yes 🟢 🟢 1.3.1 2023-09-14 2023-09-14 0 0 cc0-1.0 fovt FOVT fovt
  • Not recently pushed
fypo Fission Yeast Phenotype Ontology @ValWood 24 GitHub 🟢 15 113 Yes 🟢 🟢 1.3.1 2024-12-05 2024-12-15 0 0 cc-by-4.0 fypo FYPO fypo
gallont Plant Gall Ontology @adeans 4 GitHub 🟢 1 8 No 🔴 🔴 None 2024-09-09 2024-10-11 0 0 cc0-1.0 gallont GALLONT
  • Contact is inactive
  • Could not look up contact on wikidata via github
  • Missing ols mapping
  • Missing obofoundry github topic
  • Not using odk
gecko Genomics Cohorts Knowledge Ontology @beckyjackson 10 GitHub 🟢 7 10 Yes 🟢 🔴 None 2021-01-20 2022-05-24 0 0 other gecko GECKO gecko
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
genepio Genomic Epidemiology Ontology @ddooley 16 GitHub 🟢 19 25 Yes 🟢 🔴 None 2024-12-18 2024-12-18 0 0 other genepio GENEPIO genepio
  • Not using odk
  • Non-standard license given on github
geno Genotype Ontology @mbrush 19 GitHub 🟢 18 39 Yes 🟢 🟢 unknown 2023-10-12 2024-12-05 0 0 geno GENO geno
  • Not recently pushed
  • No license on github
geo Geographical Entity Ontology @hoganwr 14 GitHub 🟢 10 14 No 🔴 🔴 None 2024-03-31 2024-11-07 0 0 cc-by-4.0 geogeo GEO geo
  • Missing obofoundry github topic
  • Not using odk
gno Glycan Naming and Subsumption Ontology (GNOme) @edwardsnj 19 GitHub 🟢 7 1 Yes 🟢 🔴 None 2024-12-18 2024-12-18 0 0 cc-by-4.0 gno GNO gno
  • Not using odk
go Gene Ontology @suzialeksander 32 GitHub 🟢 225 786 Yes 🟢 🔴 None 2024-12-24 2024-12-25 3952 39 @pgaudet (1513) 21887 39 @pgaudet (11215) cc-by-4.0 go GO go
  • Not using odk
gsso Gender, Sex, and Sexual Orientation (GSSO) ontology @Superraptor 6 GitHub 🟢 45 3 Yes 🟢 🔴 None 2024-06-13 2024-09-17 0 0 apache-2.0 gsso GSSO gsso
  • Title contains prefix
  • Not using odk
  • Inappropriate software license given on github
hancestro Human Ancestry Ontology @daniwelter 19 GitHub 🟢 6 11 Yes 🟢 🔴 None 2024-08-19 2024-12-13 0 0 cc-by-4.0 hancestro HANCESTRO hancestro
  • Not using odk
hao Hymenoptera Anatomy Ontology @mjy 18 GitHub 🟢 4 3 Yes 🟢 🔴 None 2023-06-01 2023-06-21 0 0 cc0-1.0 hao HAO hao
  • Not using odk
  • Not recently pushed
hom Homology Ontology @fbastian 19 GitHub 🟢 0 2 Yes 🟢 🔴 None 2021-01-07 2023-03-06 0 0 cc0-1.0 hom HOM hom
  • Not using odk
  • Not recently pushed
hp Human Phenotype Ontology @drseb 24 GitHub 🟢 295 241 Yes 🟢 🟢 1.3.1 2024-12-19 2024-12-23 0 0 other hp HP_O hp
  • Non-standard license given on github
hsapdv Human Developmental Stages @fbastian 16 GitHub 🟢 10 56 Yes 🟢 🔴 None 2024-12-11 2024-12-19 0 0 hsapdv HSAPDV hsapdv
  • Not using odk
  • No license on github
hso Health Surveillance Ontology @nandadorea 9 GitHub 🟢 3 0 Yes 🟢 🔴 None 2021-12-13 2021-12-13 0 0 hso HSO hso
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
htn Hypertension Ontology @aellenhicks 9 GitHub 🟢 0 12 No 🔴 🔴 None 2022-04-19 2023-03-03 0 0 cc-by-4.0 htn HTN htn
  • Contact is inactive
  • Missing obofoundry github topic
  • Not using odk
  • Not recently pushed
iao Information Artifact Ontology @zhengj2007 22 GitHub 🟢 80 136 Yes 🟢 🔴 None 2024-05-10 2024-12-06 0 0 cc-by-4.0 iao IAO iao
  • Not using odk
iceo Integrative and Conjugative Element Ontology @Lemon-Liu 14 GitHub 🟢 4 0 Yes 🟢 🔴 None 2022-10-24 2022-01-26 0 0 other iceo ICEO iceo
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
ico Informed Consent Ontology @yongqunh 15 GitHub 🟢 7 22 Yes 🟢 🔴 None 2024-01-14 2023-06-07 0 0 other ico ICO ico
  • Not using odk
  • Non-standard license given on github
ido Infectious Disease Ontology @lgcowell 10 GitHub 🟢 6 12 Yes 🟢 🔴 None 2020-05-13 2024-04-12 0 0 ido IDO ido
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
ino Interaction Network Ontology @yongqunh 13 GitHub 🟢 2 0 Yes 🟢 🔴 None 2023-03-05 2023-03-05 0 0 ino INO ino
  • Not using odk
  • Not recently pushed
  • No license on github
kisao Kinetic Simulation Algorithm Ontology @jonrkarr 10 GitHub 🟢 10 9 No 🔴 🔴 None 2024-12-02 2024-12-03 0 0 artistic-2.0 biomodels.kisao KISAO kisao
  • Contact is inactive
  • Missing obofoundry github topic
  • Not using odk
labo clinical LABoratory Ontology @pfabry 17 GitHub 🟢 2 0 Yes 🟢 🔴 None 2023-03-06 2023-03-21 0 0 cc-by-4.0 labo LABO labo
  • Not using odk
  • Not recently pushed
lepao Lepidoptera Anatomy Ontology @luis-gonzalez-m 16 GitHub 🟢 1 0 Yes 🟢 🟢 1.2.30 2023-02-18 2023-02-18 0 0 cc-by-4.0 lepao LEPAO lepao
  • Contact is inactive
  • Not recently pushed
ma Mouse adult gross anatomy @tfhayamizu 14 GitHub 🟢 5 61 Yes 🟢 🔴 None 2023-11-14 2024-11-20 0 0 other ma MA ma
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
maxo Medical Action Ontology @LCCarmody 26 GitHub 🟢 52 4 Yes 🟢 🟢 1.3.0 2024-12-23 2024-12-23 0 0 cc-by-4.0 maxo MAXO maxo
mco Microbial Conditions Ontology @citmejia 8 GitHub 🟢 6 2 No 🔴 🔴 None 2022-07-01 2023-03-03 0 0 mco MCO mco
  • Missing obofoundry github topic
  • Not using odk
  • Not recently pushed
  • No license on github
mcro Model Card Report Ontology @ProfTuan 5 GitHub 🟢 4 0 No 🔴 🔴 None 2023-07-05 0 0 other mcro MCRO
  • Could not look up contact on wikidata via github
  • Missing ols mapping
  • Missing obofoundry github topic
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
mf Mental Functioning Ontology @jannahastings 16 GitHub 🟢 26 3 Yes 🟢 🔴 None 2023-03-04 2023-05-11 0 0 other mf MF mf
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
mfoem Emotion Ontology @jannahastings 18 GitHub 🟢 53 1 Yes 🟢 🔴 None 2024-10-31 2024-07-05 0 0 mfoem MFOEM mfoem
  • Not using odk
  • No license on github
mfomd Mental Disease Ontology @jannahastings 15 GitHub 🟢 26 3 Yes 🟢 🔴 None 2023-03-04 2023-05-11 0 0 86 3 @jannahastings (84) other mfomd MFOMD mfomd
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
mi Molecular Interactions Controlled Vocabulary @luanalicata 13 GitHub 🟢 4 13 No 🔴 🔴 None 2024-11-29 2024-09-10 0 0 cc-by-4.0 mi MI mi
  • Missing obofoundry github topic
  • Not using odk
miapa MIAPA Ontology @hlapp 19 GitHub 🟢 9 17 Yes 🟢 🔴 None 2022-04-25 2022-10-31 0 0 cc0-1.0 miapa MIAPA miapa
  • Not using odk
  • Not recently pushed
mmo Measurement method ontology @jrsjrs 13 GitHub 🟢 1 1 Yes 🟢 🔴 None 2024-12-20 2023-03-07 0 0 mmo MMO mmo
  • Not using odk
  • No license on github
mmusdv Mouse Developmental Stages @fbastian 16 GitHub 🟢 10 56 Yes 🟢 🔴 None 2024-12-11 2024-12-19 0 0 mmusdv MMUSDV mmusdv
  • Not using odk
  • No license on github
mod Protein modification @pabinz 14 GitHub 🟢 8 17 Yes 🟢 🔴 None 2022-06-13 2024-01-26 0 0 cc-by-4.0 mod PSIMOD mod
  • Contact is inactive
  • Not using odk
  • Not recently pushed
mondo Mondo Disease Ontology @nicolevasilevsky 32 GitHub 🟢 237 441 Yes 🟢 🔴 None 2024-12-23 2024-12-23 904 44 @sabrinatoro (233) 14447 44 @nicolevasilevsky (7903) cc-by-4.0 mondo MONDO mondo
  • Not using odk
mop Molecular Process Ontology @batchelorc 20 GitHub 🟢 40 23 Yes 🟢 🔴 None 2023-04-17 2023-11-17 0 0 cc-by-4.0 mop MOP mop
  • Not using odk
  • Not recently pushed
mp Mammalian Phenotype Ontology @sbello 24 GitHub 🟢 19 271 Yes 🟢 🟢 1.3.1 2024-12-19 2024-12-18 0 0 cc-by-4.0 mp MP mp
mpath Mouse pathology ontology @PaulNSchofield 15 GitHub 🟢 0 2 Yes 🟢 🔴 None 2023-09-30 2023-09-30 0 0 mpath MPATH mpath
  • Not using odk
  • Not recently pushed
  • No license on github
mpio Minimum PDDI Information Ontology @mbrochhausen 16 GitHub 🟢 1 1 Yes 🟢 🔴 None 2023-10-17 2023-03-21 0 0 cc-by-4.0 mpio MPIO mpio
  • Not using odk
  • Not recently pushed
mro MHC Restriction Ontology @bpeters42 13 GitHub 🟢 8 17 Yes 🟢 🔴 None 2024-08-02 2024-07-15 0 0 mro mro
  • Missing bioportal mapping
  • Not using odk
  • No license on github
ms Mass spectrometry ontology @germa 13 GitHub 🟢 28 5 Yes 🟢 🔴 None 2024-11-11 2024-11-28 0 0 other ms MS ms
  • Contact is inactive
  • Not using odk
  • Non-standard license given on github
nbo Neuro Behavior Ontology @gkoutos 21 GitHub 🟢 25 22 Yes 🟢 🟢 1.3.0 2024-02-04 2024-02-04 0 0 nbo NBO nbo
  • No license on github
ncbitaxon NCBI organismal classification @fbastian 16 GitHub 🟢 27 29 Yes 🟢 🔴 None 2024-11-25 2024-11-28 0 0 bsd-3-clause ncbitaxon NCBITAXON ncbitaxon
  • Not using odk
  • Inappropriate software license given on github
ncit NCI Thesaurus OBO Edition @mellybelly 13 GitHub 🟢 23 58 Yes 🟢 🔴 None 2024-05-07 2024-03-14 0 0 ncit NCIT ncit
  • Contact is inactive
  • Not using odk
  • No license on github
ncro Non-Coding RNA Ontology @Huang-OMIT 14 GitHub 🟢 5 23 Yes 🟢 🔴 None 2023-03-23 2023-03-23 0 0 cc-by-4.0 ncro NCRO ncro
  • Contact is inactive
  • Not using odk
  • Not recently pushed
ngbo Next Generation Biobanking Ontology @dalalghamdi 3 GitHub 🟢 3 0 No 🔴 🔴 None 2024-09-04 2022-06-17 0 0 other ngbo NGBO ngbo
  • Contact is inactive
  • Could not look up contact on wikidata via github
  • Missing obofoundry github topic
  • Not using odk
  • Non-standard license given on github
nomen NOMEN - A nomenclatural ontology for biological names @mjy 4 GitHub 🟢 12 11 Yes 🟢 🔴 None 2023-12-15 2023-10-27 0 0 unlicense nomen NOMEN nomen
  • Title contains prefix
  • Not using odk
  • Not recently pushed
oae Ontology of Adverse Events @yongqunh 14 GitHub 🟢 5 7 Yes 🟢 🔴 None 2022-09-03 2024-02-27 0 0 oae OAE oae
  • Not using odk
  • Not recently pushed
  • No license on github
oarcs Ontology of Arthropod Circulatory Systems @mjy 12 GitHub 🟢 1 6 Yes 🟢 🔴 None 2019-04-18 2023-01-04 0 0 other oarcs OARCS oarcs
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
oba Ontology of Biological Attributes @cmungall 25 GitHub 🟢 27 86 Yes 🟢 🟢 1.3.1 2024-11-26 2024-11-26 0 0 cc0-1.0 oba OBA oba
obcs Ontology of Biological and Clinical Statistics @zhengj2007 14 GitHub 🟢 2 3 Yes 🟢 🔴 None 2024-02-27 2024-02-21 0 0 obcs OBCS obcs
  • Not using odk
  • No license on github
obi Ontology for Biomedical Investigations @bpeters42 22 GitHub 🟢 75 252 Yes 🟢 🔴 None 2024-12-19 2024-12-19 0 0 cc-by-4.0 obi OBI obi
  • Not using odk
obib Ontology for Biobanking @jmwhorton 15 GitHub 🟢 14 19 Yes 🟢 🔴 None 2024-07-25 2024-07-24 0 0 other obib OBIB obib
  • Could not look up contact on wikidata via github
  • Not using odk
  • Non-standard license given on github
occo Occupation Ontology @zhengj2007 7 GitHub 🟢 5 23 No 🔴 🔴 None 2024-04-29 2024-09-25 0 0 occo OCCO
  • Missing ols mapping
  • Missing obofoundry github topic
  • Not using odk
  • No license on github
ogg The Ontology of Genes and Genomes @yongqunh 13 No 🔴 0 0 No 🔴 🔴 None 0 0 0 0 ogg OGG ogg
ogms Ontology for General Medical Science @BAevermann 20 GitHub 🟢 21 66 Yes 🟢 🔴 None 2022-04-19 2024-12-21 0 0 cc-by-4.0 ogms OGMS ogms
  • Not using odk
  • Not recently pushed
ohd Oral Health and Disease Ontology @wdduncan 19 GitHub 🟢 8 57 Yes 🟢 🔴 None 2024-12-20 2024-12-03 0 0 cc-by-4.0 ohd OHD ohd
  • Not using odk
ohmi Ontology of Host-Microbiome Interactions @yongqunh 15 GitHub 🟢 12 10 Yes 🟢 🔴 None 2022-04-19 2023-03-20 0 0 ohmi OHMI ohmi
  • Not using odk
  • Not recently pushed
  • No license on github
ohpi Ontology of Host Pathogen Interactions @e4ong1031 11 GitHub 🟢 0 1 Yes 🟢 🔴 None 2022-04-19 2023-03-20 0 0 ohpi OHPI ohpi
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
omit Ontology for MIRNA Target @Huang-OMIT 10 GitHub 🟢 4 9 Yes 🟢 🔴 None 2017-05-08 2023-10-04 0 0 omit OMIT omit
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
omo OBO Metadata Ontology @cmungall 24 GitHub 🟢 19 89 Yes 🟢 🟢 1.3.0 2024-11-14 2024-11-14 0 0 cc0-1.0 omo OMO omo
omp Ontology of Microbial Phenotypes @jimhu-tamu 5 GitHub 🟢 8 115 No 🔴 🔴 None 2024-03-25 2023-12-12 0 0 omp OMP omp
  • Contact is inactive
  • Missing obofoundry github topic
  • Not using odk
  • No license on github
omrse Ontology for Modeling and Representation of Social Entities @hoganwr 20 GitHub 🟢 14 32 Yes 🟢 🔴 None 2024-11-26 2024-12-02 0 0 cc-by-4.0 omrse OMRSE omrse
  • Not using odk
one Ontology for Nutritional Epidemiology @cyang0128 10 GitHub 🟢 8 3 Yes 🟢 🔴 None 2022-04-19 2022-10-31 0 0 one ONE one
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
ons Ontology for Nutritional Studies @FrancescoVit 16 GitHub 🟢 11 12 Yes 🟢 🔴 None 2024-07-05 2024-07-05 0 0 cc-by-4.0 ons ONS ons
  • Contact is inactive
  • Not using odk
ontoavida OntoAvida: ontology for Avida digital evolution platform @miguelfortuna 3 No 🔴 0 0 No 🔴 🔴 None 0 0 0 0 ontoavida ONTOAVIDA ontoavida
  • Title contains prefix
ontoneo Obstetric and Neonatal Ontology @FernandaFarinelli 18 GitHub 🟢 4 6 Yes 🟢 🔴 None 2022-06-05 2023-08-31 0 0 cc0-1.0 ontoneo ONTONEO ontoneo
  • Not using odk
  • Not recently pushed
oostt Ontology of Organizational Structures of Trauma centers and Trauma systems @mbrochhausen 19 GitHub 🟢 5 9 Yes 🟢 🔴 None 2024-09-30 2024-09-27 0 0 cc-by-4.0 oostt OOSTT oostt
  • Not using odk
opl Ontology for Parasite LifeCycle @zhengj2007 18 GitHub 🟢 3 0 Yes 🟢 🔴 None 2024-07-25 2023-08-30 0 0 cc-by-4.0 opl OPL opl
  • Not using odk
opmi Ontology of Precision Medicine and Investigation @yongqunh 19 GitHub 🟢 6 12 Yes 🟢 🔴 None 2024-03-16 2024-12-20 0 0 cc-by-4.0 opmi OPMI opmi
  • Not using odk
ornaseq Ontology of RNA Sequencing @safisher 13 GitHub 🟢 2 2 Yes 🟢 🔴 None 2022-10-27 2022-10-27 0 0 cc-by-4.0 ornaseq ORNASEQ ornaseq
  • Contact is inactive
  • Not using odk
  • Not recently pushed
ovae Ontology of Vaccine Adverse Events @yongqunh 17 GitHub 🟢 3 1 Yes 🟢 🔴 None 2023-03-05 2023-03-05 0 0 cc0-1.0 ovae OVAE ovae
  • Not using odk
  • Not recently pushed
pato Phenotype And Trait Ontology @gkoutos 21 GitHub 🟢 58 126 Yes 🟢 🟢 1.3.1 2024-12-01 2024-12-01 0 0 bsd-3-clause pato PATO pato
  • Inappropriate software license given on github
pcl Provisional Cell Ontology @dosumis 24 GitHub 🟢 12 20 Yes 🟢 🟢 1.3.0 2024-12-19 2024-12-23 0 0 cc-by-4.0 pcl PCL pcl
pco Population and Community Ontology @ramonawalls 23 GitHub 🟢 16 30 Yes 🟢 🟢 1.2.21 2022-10-27 2022-10-27 0 0 cc0-1.0 pco PCO pco
  • Not recently pushed
pdro The Prescription of Drugs Ontology @pfabry 18 GitHub 🟢 5 0 Yes 🟢 🔴 None 2023-05-03 2024-05-31 0 0 cc-by-4.0 pdro PDRO pdro
  • Not using odk
  • Not recently pushed
peco Plant Experimental Conditions Ontology @jaiswalp 20 GitHub 🟢 10 14 Yes 🟢 🔴 None 2024-05-17 2024-05-17 0 0 cc-by-4.0 peco PECO peco
  • Not using odk
phipo Pathogen Host Interaction Phenotype Ontology @CuzickA 19 GitHub 🟢 5 29 Yes 🟢 🟢 1.2.28 2024-10-16 2024-09-13 0 0 other phipo PHIPO phipo
  • Non-standard license given on github
plana planaria-ontology @srobb1 18 GitHub 🟢 5 10 Yes 🟢 🟢 1.3.0 2023-03-13 2023-05-03 0 0 plana PLANA plana
  • Not recently pushed
  • No license on github
planp Planarian Phenotype Ontology @srobb1 18 GitHub 🟢 6 5 Yes 🟢 🟢 1.2.20 2023-02-19 2023-02-19 0 0 planp PLANP planp
  • Not recently pushed
  • No license on github
po Plant Ontology @jaiswalp 22 GitHub 🟢 60 111 Yes 🟢 🔴 None 2024-12-07 2024-10-30 0 0 cc-by-4.0 po PO po
  • Not using odk
poro Porifera Ontology @bobthacker 10 GitHub 🟢 6 11 Yes 🟢 🔴 None 2021-11-08 2021-11-08 0 0 poro PORO poro
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
ppo Plant Phenology Ontology @ramonawalls 16 GitHub 🟢 17 18 Yes 🟢 🔴 None 2024-12-16 2024-12-16 0 0 ppo PPO ppo
  • Not using odk
  • No license on github
pr PRotein Ontology (PRO) @nataled 16 GitHub 🟢 14 42 Yes 🟢 🔴 None 2024-12-06 2024-12-06 0 0 other pr PR pr
  • Not using odk
  • Non-standard license given on github
proco Process Chemistry Ontology @schaferw 5 GitHub 🟢 9 26 No 🔴 🔴 None 2022-12-12 2023-10-18 0 0 proco PROCO proco
  • Contact is inactive
  • Missing obofoundry github topic
  • Not using odk
  • Not recently pushed
  • No license on github
psdo Performance Summary Display Ontology @zachll 13 GitHub 🟢 3 9 Yes 🟢 🔴 None 2023-10-24 2024-03-15 0 0 other psdo PSDO psdo
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
pso Plant Stress Ontology @cooperl09 16 GitHub 🟢 15 2 Yes 🟢 🔴 None 2024-09-24 2024-07-30 0 0 pso PSO pso
  • Not using odk
  • No license on github
pw Pathway ontology @gthayman 13 GitHub 🟢 1 0 Yes 🟢 🔴 None 2024-11-12 2023-05-30 0 0 pw PW pw
  • Not using odk
  • No license on github
rbo Radiation Biology Ontology @DanBerrios 19 GitHub 🟢 5 37 Yes 🟢 🟢 1.3.0 2024-11-13 2024-12-22 0 0 rbo RBO rbo
  • No license on github
ro Relation Ontology @cmungall 18 GitHub 🟢 94 124 Yes 🟢 🔴 None 2024-12-11 2024-12-25 0 0 other ro OBOREL ro
  • Not using odk
  • Non-standard license given on github
rs Rat Strain Ontology @shurjenw 12 GitHub 🟢 0 1 Yes 🟢 🔴 None 2024-12-20 2024-01-17 0 0 rs RS rs
  • Contact is inactive
  • Not using odk
  • No license on github
rxno Name Reaction Ontology @batchelorc 21 GitHub 🟢 40 23 Yes 🟢 🔴 None 2023-04-17 2023-11-17 0 0 111 6 @batchelorc (70) cc-by-4.0 rxno RXNO rxno
  • Not using odk
  • Not recently pushed
sbo Systems Biology Ontology @rsmsheriff 19 GitHub 🟢 9 4 Yes 🟢 🔴 None 2023-05-16 2023-05-25 0 0 artistic-2.0 sbo SBO sbo
  • Not using odk
  • Not recently pushed
scdo Sickle Cell Disease Ontology @JadeHotchkiss 11 GitHub 🟢 4 4 Yes 🟢 🔴 None 2024-06-07 2024-05-31 0 0 scdo SCDO scdo
  • Contact is inactive
  • Not using odk
  • No license on github
sepio Scientific Evidence and Provenance Information Ontology @mbrush 18 GitHub 🟢 50 28 Yes 🟢 🔴 None 2024-07-26 2024-06-13 0 0 sepio SEPIO sepio
  • Not using odk
  • No license on github
slso Space Life Sciences Ontology @DanBerrios 9 GitHub 🟢 1 5 No 🔴 🟢 1.3.1 2024-11-26 2024-10-29 0 0 slso SLSO
  • Missing ols mapping
  • Missing obofoundry github topic
  • No license on github
so Sequence types and features ontology @keilbeck 22 GitHub 🟢 96 151 Yes 🟢 🔴 None 2024-11-18 2024-12-10 0 0 cc-by-4.0 so SO so
  • Not using odk
spd Spider Ontology @martinjramirez 13 GitHub 🟢 3 0 Yes 🟢 🔴 None 2023-09-04 2023-09-04 0 0 spd SPD spd
  • Not using odk
  • Not recently pushed
  • No license on github
stato The Statistical Methods Ontology @proccaserra 12 GitHub 🟢 31 0 Yes 🟢 🔴 None 2024-07-19 2024-07-19 0 0 stato STATO stato
  • Contact is inactive
  • Could not look up contact on wikidata via github
  • Not using odk
  • No license on github
swo Software ontology @allysonlister 20 GitHub 🟢 40 17 Yes 🟢 🔴 None 2023-03-05 2024-06-13 0 0 cc-by-4.0 swo SWO swo
  • Not using odk
  • Not recently pushed
symp Symptom Ontology @lschriml 21 GitHub 🟢 38 5 Yes 🟢 🔴 None 2024-05-22 2024-05-22 0 0 cc0-1.0 symp SYMP symp
  • Not using odk
t4fs terms4FAIRskills @allysonlister 9 GitHub 🟢 15 18 No 🔴 🔴 None 2023-03-03 2023-06-05 0 0 other t4fs T4FS t4fs
  • Missing obofoundry github topic
  • Not using odk
  • Not recently pushed
  • Non-standard license given on github
taxrank Taxonomic rank vocabulary @balhoff 19 GitHub 🟢 4 1 Yes 🟢 🔴 None 2024-12-03 2024-12-03 0 0 cc0-1.0 taxrank TAXRANK taxrank
  • Not using odk
to Plant Trait Ontology @jaiswalp 21 GitHub 🟢 39 256 Yes 🟢 🔴 None 2024-12-17 2024-10-23 0 0 cc-by-4.0 to PTO to
  • Not using odk
trans Pathogen Transmission Ontology @lschriml 18 GitHub 🟢 8 0 Yes 🟢 🔴 None 2023-12-18 2023-01-17 0 0 cc0-1.0 trans TRANS trans
  • Not using odk
  • Not recently pushed
tto Teleost taxonomy ontology @balhoff 16 GitHub 🟢 1 1 Yes 🟢 🔴 None 2022-04-19 2022-04-19 0 0 cc0-1.0 tto TTO tto
  • Not using odk
  • Not recently pushed
txpo Toxic Process Ontology @yuki-yamagata 8 GitHub 🟢 1 1 Yes 🟢 🔴 None 2022-12-07 2023-01-10 0 0 txpo TXPO txpo
  • Contact is inactive
  • Not using odk
  • Not recently pushed
  • No license on github
uberon Uberon multi-species anatomy ontology @cmungall 23 GitHub 🟢 135 323 Yes 🟢 🟢 1.3.1 2024-12-24 2024-12-24 0 0 other uberon UBERON uberon
  • Non-standard license given on github
uo Units of measurement ontology @gkoutos 20 GitHub 🟢 21 19 Yes 🟢 🔴 None 2023-08-09 2024-11-25 0 0 cc-by-4.0 uo UO uo
  • Not using odk
  • Not recently pushed
upheno Unified Phenotype Ontology (uPheno) @jamesamcl 11 GitHub 🟢 78 262 Yes 🟢 🟢 1.3.0 2024-12-12 2024-12-18 0 0 cc0-1.0 upheno UPHENO upheno
  • Title contains prefix
  • Contact is inactive
  • Could not look up contact on wikidata via github
vbo Vertebrate Breed Ontology @sabrinatoro 20 GitHub 🟢 11 59 Yes 🟢 🟢 1.3.1 2024-12-19 2024-12-19 0 0 vbo VBO vbo
  • No license on github
vo Vaccine Ontology @yongqunh 16 GitHub 🟢 16 23 Yes 🟢 🔴 None 2024-12-20 2024-12-25 0 0 vo VO vo
  • Not using odk
  • No license on github
vt Vertebrate trait ontology @caripark 15 GitHub 🟢 6 1 Yes 🟢 🔴 None 2024-12-12 2024-12-02 0 0 cc-by-4.0 vt VT vt
  • Contact is inactive
  • Not using odk
vto Vertebrate Taxonomy Ontology @balhoff 17 GitHub 🟢 2 6 Yes 🟢 🔴 None 2017-12-08 2023-02-14 0 0 cc0-1.0 vto VTO vto
  • Not using odk
  • Not recently pushed
wbbt C. elegans Gross Anatomy Ontology @raymond91125 23 GitHub 🟢 7 7 Yes 🟢 🟢 1.2.22 2024-09-24 2024-05-17 0 0 cc-by-4.0 wbbt WB-BT wbbt
wbls C. elegans development ontology @chris-grove 23 GitHub 🟢 5 0 Yes 🟢 🟢 1.3.1 2024-09-26 2024-09-26 0 0 cc-by-4.0 wbls WB-LS wbls
wbphenotype C. elegans phenotype @chris-grove 24 GitHub 🟢 11 3 Yes 🟢 🟢 1.3.1 2024-09-26 2024-09-26 0 0 cc-by-4.0 wbphenotype WB-PHENOTYPE wbphenotype
xao Xenopus Anatomy Ontology @seger 15 GitHub 🟢 6 2 Yes 🟢 🔴 None 2024-09-03 2024-08-23 0 0 xao XAO xao
  • Not using odk
  • No license on github
xco Experimental condition ontology @jrsjrs 14 GitHub 🟢 2 1 Yes 🟢 🔴 None 2024-12-20 2023-03-16 0 0 xco XCO xco
  • Not using odk
  • No license on github
xlmod HUPO-PSI cross-linking and derivatization reagents controlled vocabulary @lutzfischer 9 GitHub 🟢 0 1 No 🔴 🔴 None 2024-05-09 2024-05-15 0 0 apache-2.0 xlmod XLMOD xlmod
  • Missing obofoundry github topic
  • Not using odk
  • Inappropriate software license given on github
xpo Xenopus Phenotype Ontology @seger 20 GitHub 🟢 9 20 Yes 🟢 🟢 1.3.0 2024-11-07 2024-11-13 0 0 xpo XPO xpo
  • No license on github
zeco Zebrafish Experimental Conditions Ontology @ybradford 18 GitHub 🟢 4 22 Yes 🟢 🟢 1.2.23 2022-03-06 2024-05-16 0 0 zeco ZECO zeco
  • Not recently pushed
  • No license on github
zfa Zebrafish anatomy and development ontology @cerivs 12 GitHub 🟢 6 50 No 🔴 🟢 1.3.0 2023-11-21 2024-12-07 0 0 other zfa ZFA zfa
  • Missing obofoundry github topic
  • Not recently pushed
  • Non-standard license given on github
zfs Zebrafish developmental stages ontology @cerivs 12 GitHub 🟢 6 50 No 🔴 🟢 1.3.0 2023-11-21 2024-12-07 0 0 other zfs ZFS zfs
  • Missing obofoundry github topic
  • Not recently pushed
  • Non-standard license given on github
zp Zebrafish Phenotype Ontology @ybradford 20 GitHub 🟢 9 21 Yes 🟢 🟢 1.2.31 2024-04-18 2024-08-19 0 0 zp ZP zp
  • No license on github