OLS Standardization Analysis

This page summarize various OLS instances’ prefixes’ conformance to the Bioregistry standard.

Instance	# Standard	% Standard	# Non-standard	% Non-standard	# Unknown	% Unknown
EBI	241	96.0	7	2.8	3	1.2
Fraunhofer	4	30.8	0	0.0	9	69.2
Monarch	3	33.3	0	0.0	6	66.7
NFDI4Cat	11	73.3	0	0.0	4	26.7
NFDI4Chem	33	84.6	1	2.6	5	12.8
ZBMed	30	76.9	2	5.1	7	17.9

EBI

Unregistered

• cpont (Critical Path Ontology)
• schemaorg_http ()
• schemaorg_https ()

Non-standard

• apollo_sv (Apollo Structured Vocabulary (Apollo-SV)) could be standardized to apollosv
• kisao (Kinetic Simulation Algorithm Ontology) could be standardized to biomodels.kisao
• nmrcv (nuclear magnetic resonance CV) could be standardized to nmr
• oio () could be standardized to oboinowl
• ordo (Orphanet Rare Disease Ontology) could be standardized to orphanet.ordo
• snomed (SNOMED CT (International Edition)) could be standardized to snomedct
• teddy (Terminology for Description of Dynamics) could be standardized to biomodels.teddy

Fraunhofer

Unregistered

• amdp (Arbeitsgemeinschaft fuer Methodik und Dokumentation in der Psychiatrie)
• bpdo (Bipolar Disorder Ontology)
• brct (Brain Region and Cell- Type Terminology (BRCT))
• hupson (Human Physiology Simulation Ontology (HuPSON))
• mso (Multiple Sclerosis Ontology (MSO))
• nift (Neuro-Imaging Feature Terminology (NIFT))
• pdon (Parkinson's Disease Ontology)
• pts (Pathway Terminology System)
• schizo (Schizophrenia Ontology)

Monarch

Unregistered

• chr (Monochrom Ontology)
• hplymph (Human Phenotype Ontology)
• mondo_patterns (Mondo Disease Ontology Pattern Ontology)
• mondo_rare (Mondo Disease Ontology (Rare Disease Subset))
• upheno2 (Unified Phenotype Ontology (uPheno2))
• upheno_patterns (Unified Phenotype Ontology Pattern Ontology)

NFDI4Cat

Unregistered

• cif (Crystallography domain ontology)
• ontocompchem (Computational Chemistry Ontology)
• ontokin (Ontology for Chemical Kinetic Reaction Mechanisms)
• osmo (Ontology for simulation, modelling, and optimization)

NFDI4Chem

Unregistered

• oboe (The Extensible Observation Ontology)
• sosa (Sensor, Observation, Sample, and Actuator (SOSA) Ontology)
• ssn (Semantic Sensor Network Ontology)
• ssnsystem (System capabilities, operating ranges, and survival ranges ontology)
• vibso (Vibrational Spectroscopy Ontology (VIBSO))

Non-standard

• nmrcv (nuclear magnetic resonance CV) could be standardized to nmr

ZBMed

Unregistered

• afeo (Agri-Food Experiment Ontology (AFEO))
• ahol (Animal Health Ontology for Livestock)
• covid_var (SARS-CoV-2 virus variants)
• extruont (ExtruOnt)
• maelstrom (Maelstrom Research Taxonomies)
• rid (Radiology Lexicon)
• sc2v (SARS-CoV-2 Proteins)

Non-standard

• meshd (Medical Subject Headings - Diseases) could be standardized to mesh
• snomed (SNOMED CT (International Edition)) could be standardized to snomedct